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Genome Technology: High-throughput Methods
Date: Monday, January 14, 2013
Time: 7:00 AM-10:00 PM
Room: Grand Exhibit Hall
Exome Capture Method for Complex Genomes
Jessica R. Kirkpatrick, University of Illinois Urbana-Champaign;
Therese Mitros, UC Berkeley;
Kankshita Swaminathan, University of Illinois Urbana-Champaign;
Megan Hall, UC Berkeley;
Matthew E. Hudson, University of Illinois Urbana-Champaign;
Katarzyna Glowaca, Institute of Plant Genetics, Polish Academy of Sciences;
Stanislaw Jezowski, Institute of Plant Genetics, Polish Academy of Sciences;
Daniel S. Rokhsar, UC Berkeley;
Stephen P. Moose, University of Illinois Urbana-Champaign
Optical Mapping and Nanocoding Systems: Single Molecule Discovery for Genome Assembly and Structural Variation
Shiguo Zhou, University of Wisconsin-Madison;
Konstantinos Potamousis, University of Wisconsin-Madison;
Steve Goldstein, University of Wisconsin-Madison;
Mike Place, University of Wisconsin-Madison;
Mike Bechner, University of Wisconsin-Madison;
Prabu Ravindran, University of Wisconsin-Madison;
Kristy Kounovsky, University of Wisconsin-Madison;
Louise Pape, University of Wisconsin-Madison;
Brian Teague, University of Wisconsin-Madison;
John Nguyen, University of Southern California;
Fusheng Wei, University of Arizona, iPlant Collaborative;
Vivek Krishnakumar, J. Craig Venter Institute;
Victor Guryev, Hubrecht Institute;
Shu Ouyang, Michigan State University;
Christopher D. Town, J. Craig Venter Institute;
Edwin Cuppen, Hubrecht Institute;
Rod A. Wing, Arizona Genomics Institute, University of Arizona;
C. Robin Buell, Michigan State University;
Jeffrey Kidd, University of Washington-Seattle;
Evan Eichler, University of Washington;
Michael Waterman, University of Southern California;
Juan F. Medrano, University of California-Davis;
David C. Schwartz, University of Wisconsin-Madison
40 kb Long-Span, Mate-Pair NGS Library Version 2.0
Rosa Ye, Lucigen Corporation;
Svetlana Jasinovica, Lucigen Corporation;
Megan Wagner, Lucigen Corporation;
Amanda Krerowicz, Lucigen Corporation;
Amy Hin-Yan Tong, The University of Hong Kong;
Si Lok, The Chinese University of Hong Kong;
Ronald Godiska, Lucigen Corporation;
Michael J. Lodes, Lucigen Corporation;
Peter Ladell, Lucigen Corporation;
Jason Mayr, Lucigen Corporation;
David Mead, Lucigen Corporation;
Cheng-Cang Wu, Lucigen Corporation
Low Density Marker Assays (LDMA) for High Throughput, Highly Multiplexed Detection, CNV, Methylation, and Expression Assays
John D Curry, Eureka Genomics;
Paul Dier, Eureka Genomics;
Maria Shin, Eureka Genomics;
Jessica Nguyen, Eureka Genomics;
Nadeem Bulsara, Eureka Genomics;
R. Mark Thallman, USDA-ARS, U.S. Meat Animal Research Center;
Viacheslav Y. Fofanov, Eureka Genomics;
Heather Koshinsky, Eureka Genomics
SNP Genotyping using Affymetrix' Axiom® Genotyping Solution
Michael Shapero, Affymetrix Inc.;
Matthew Purdy, Affymetrix;
Raj Kurapati, Affymetrix;
Jane Law, Affymetrix;
Hemin Lee, Affymetrix;
Halina Loi, Affymetrix;
Devin Nguyen, Affymetrix;
Pei-Hua Wang, Affymetrix;
Antonita Yan, Affymetrix;
Chisou Yu, Affymetrix;
Mohsen Shirazi, Affymetrix;
Laurent R. Bellon, Affymetrix Inc.
Skim Based Genotyping by Sequencing in Complex Crop Genomes
Philipp Emanuel Bayer, University of Queensland;
Paul Visendi, Australian Centre for Plant Functional Genomics;
Hong Lee, University of Queensland;
Kenneth Chan, University of Queensland;
Michał T. Lorenc, Australian Centre for Plant Functional Genomics;
Kaitao Lai, University of Queensland;
Jessica Dalton-Morgan, University of Queensland;
Yan Long, Huazhong Agricultural University;
Jinling Meng, Huazhong Agricultural University;
Jacqueline Batley, University of Queensland;
David Edwards, University of Queensland
Libraries Preparation Automation on a TECAN EVO200
Olivier Bouchez, INRA GeT Genomics Facility;
Cécile Donnadieu, Plateforme Genomique;
Gerald Salin, INRA, UMR444 LGC - GeT-PlaGe Genomics Facility;
Diane Esquerre, Plateforme Genomique;
Cemile Ant, Tecan;
David Rodarie, Tecan;
Denis Milan, INRA
A Systems-Genetics Analysis of Bovine Skeletal Muscle Iron Level
James M. Reecy, Department of Animal Science, Iowa State University;
James Koltes, Department of Animal Science, Iowa State University;
Richard G. Tait Jr, Iowa State University;
Mary Sue Mayes, Iowa State University;
Raluca Mateescu, Oklahoma State University;
Dorian J. Garrick, Department of Animal Science, Iowa State University;
Donald C Beitz, Iowa State University
Production of Long (1.5kb – 15.0kb), Accurate, DNA Sequencing Reads using an Illumina HiSeq2000 to Support de novo Assembly of the Blue Catfish Genome
Geoff Waldbieser, USDA - Agricultrural Research Service;
Michael Kertesz, Moleculo, Inc.;
Dmitry Pushkarev, Moleculo, Inc.;
Tim Blauwkamp, Moleculo, Inc.;
John Liu, Auburn University
Enabling Cloud and Grid Powered Image Phenotyping
Nirav Merchant, iPlant Collaborative/University of Arizona;
Nathan Miller, University of Wisconsin;
Kris Kvilekval, University of California Santa Barbara;
Edgar Spalding, University of Wisconsin;
B.S. Manjunath, University of California Santa Barbara
